Index

A

asarray() (munge.DataElement.DataElement method) (munge.Dataset.Dataset method)

C

csv2dict() (in module munge.utils.misc)

D

DataElement (class in munge.DataElement) DataLoader (class in munge.DataLoader)

Dataset (class in munge.Dataset) dilate() (munge.ImageThresholder.ImageThresholder method)

G

get_all() (munge.Dataset.Dataset method) get_app_config() (in module munge.utils.misc) get_area_in_sqmm() (munge.DataElement.DataElement method) get_bounding_box_coords() (in module munge.utils.misc) get_by_study() (munge.Dataset.Dataset method) get_dcm_num_for_contour() (in module munge.utils.contour) get_dcm_resolution() (in module munge.utils.image)

get_image_icontour_overlay() (munge.DataElement.DataElement method) get_image_ocontour_overlay() (munge.DataElement.DataElement method) get_jaccard_coeff() (munge.ImageThresholder.ImageThresholder method) get_ocontour_for_icontour() (in module munge.utils.misc) get_roi_avg_relative_intensity() (munge.DataElement.DataElement method) get_thresholded_contour_mask() (munge.ImageThresholder.ImageThresholder method) get_uuid() (in module munge.utils.misc) grayscale_to_rgb() (in module munge.utils.image)

I

ImageThresholder (class in munge.ImageThresholder)

L

load_train_data() (munge.DataLoader.DataLoader method)

M

munge.DataElement (module) munge.DataLoader (module) munge.Dataset (module)

munge.ImageThresholder (module) munge.utils.contour (module) munge.utils.image (module) munge.utils.misc (module)

O

overlay_contours() (munge.DataElement.DataElement method)

P

parse_contour_file() (in module munge.utils.contour) parse_dicom_file() (in module munge.utils.image) plot_model_fit() (munge.ImageThresholder.ImageThresholder method)

plot_random_epoch() (munge.DataLoader.DataLoader static method) plot_thresholding_result() (munge.ImageThresholder.ImageThresholder method) plot_verification_for_study() (munge.Dataset.Dataset method) poly_to_mask() (in module munge.utils.contour)

T

to_dict() (munge.Dataset.Dataset method)